Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837389.1_cds_XP_016506608.1_19819
CDS Infomation

[gene=LOC107824377] [db_xref=GeneID:107824377] [protein=mannan endo-1,4-beta-mannosidase 1-like] [protein_id=XP_016506608.1] [location=join(24961..25296,25609..25803,26051..26173,26278..26480,26610..26976)] [gbkey=CDS]
Sequence

ATGTCTTTTACAACAACGAGCTGTATTTCTGGCCTTCTGCTCTTGTTTCTAGCTCTCACA
TGCGAAGCTAGGGTCCCAAAAAATGCAAATGTAGGTTTTATAGCAGTTAATGGTGCCCAT
TTTGAACTGAATGGATCCTCATTTCTATTCAATGGTTTCAACTCGTATTGGTTGATGCAT
GTTGCTGCTGAACCTAGTGAGAGGTACAAAGTCACTGAGGTTCTTAAAGATGCATCCGCT
GCCGGTCTATCTGTTTGTCGCACATGGGCTTTCAGTGATGGAGGTGACAGAGCATTACAA
ATATCACCTGGAGTTTACGATGAACGTGTTTTTCAGGGTTTGGATTTTGTGATATCGGAA
GCTAAGAAATATGGTGTTCGCTTAATCTTGAGTTTTGTGAACAATTGGAACGACTTTGGA
GGAAAAGCTCAATATGTCCAGTGGGCACGGAATGTCGGGGCTCAGATAAACGGCGACGAC
GATTTCTATACTCATCCTATGCTCAAAGATTATTACAAGAACCACATCAAGAAAGTTATT
ACAAGATTCAATACCATTACAAAAGTTGCTTACAGAGATGATCCAACAATTATGGCATGG
GAACTCATTAATGAGCCCCGTAATCAAGCTGATTATTCTGGAAAAACTATTAATGCTTGG
GTTCAAGAAATGGCAAGTTTTGTGAAGTCACTTGACAAAAAACACTTGTTGGAGGTAGGA
ATGGAAGGATTTTATGGCGATTCAGTTCCTGAAAGGAAGCAAGTTAATCCCGGTTATCAA
GTGGGAACAGATTTTATCAGTAACCATCTTATCAATGAGATTGATTTTGCCACTATCCAT
GCGTACACTGACCAGTGGGTATCTGGACAAAGCGATGAAGCTCAATTGGCATGGATGCAA
AGGTGGGTGACAAGCCATTGGGAAGATGCAAAAACCATACTAAAGAAACCTCTAGTACTA
TCTGAATTTGGCAAGTCTAGTAGAGATCAAGGATACAACCTTAATTCAAGAGACACATTC
ATGGGTAGTGTATATAGAAATATCTACAATTTGGCAAAAGAAGGGGGAAGCATGGCAGGA
AGCTTAGTATGGCAACTTATGGCACACGGAATGGAGAATTATGATGATGGTTATTGTATT
GTTTTGGGACAAAACCCTTCGACTACAGGGATAATTTCAGGCCAATCACATGCCATGACA
ACTTTGGCTAATCGCATTGAGTGA

Peptide Sequence

PEP ID

XP_016506608.1
PEP Infomation

PREDICTED: mannan endo-1,4-beta-mannosidase 1-like [Nicotiana tabacum]
Sequence

MSFTTTSCISGLLLLFLALTCEARVPKNANVGFIAVNGAHFELNGSSFLFNGFNSYWLMH
VAAEPSERYKVTEVLKDASAAGLSVCRTWAFSDGGDRALQISPGVYDERVFQGLDFVISE
AKKYGVRLILSFVNNWNDFGGKAQYVQWARNVGAQINGDDDFYTHPMLKDYYKNHIKKVI
TRFNTITKVAYRDDPTIMAWELINEPRNQADYSGKTINAWVQEMASFVKSLDKKHLLEVG
MEGFYGDSVPERKQVNPGYQVGTDFISNHLINEIDFATIHAYTDQWVSGQSDEAQLAWMQ
RWVTSHWEDAKTILKKPLVLSEFGKSSRDQGYNLNSRDTFMGSVYRNIYNLAKEGGSMAG
SLVWQLMAHGMENYDDGYCIVLGQNPSTTGIISGQSHAMTTLANRIE

Transcript Sequence

Gene sequence data has not been registered.